Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01931 | Not Available | Negative | 65117 - 65782 | 24771.7 |
| sensor histidine kinase | ALO56_01932 | Q9HWR3 | Positive | 65942 - 67072 | 41231.0 |
| curved-dna-binding protein | ALO56_04772 | Q87VN8 | Negative | 67419 - 68360 | 34451.8 |
| molecular chaperone dnak | ALO56_04773 | P36928 | Positive | 68672 - 69937 | 46480.4 |
| membrane protein | ALO56_04774 | Not Available | Negative | 70059 - 71069 | 36750.8 |
| uncharacterized protein | ALO56_01935 | P37511 | Positive | 71700 - 72581 | 31789.4 |
| uncharacterized protein | ALO56_04775 | Not Available | Negative | 72578 - 72805 | 8076.44 |
| alpha/beta hydrolase | ALO56_01936 | P08658 | Negative | 72865 - 73755 | 32184.9 |
| dna-binding transcriptional activator osme | ALO56_01937 | Not Available | Positive | 73945 - 74283 | 12384.7 |
| ferritin and dp | ALO56_01938 | Not Available | Positive | 74648 - 75181 | 19988.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









