Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02939 | Not Available | Negative | 1493158 - 1493574 | 15340.6 |
| uncharacterized protein | ALO56_02940 | Q47319 | Positive | 1493778 - 1494503 | 27477.9 |
| luxr response regulator receiver | ALO56_02941 | A8R3T0 | Positive | 1494741 - 1495388 | 23398.2 |
| diacylglycerol kinase | ALO56_02942 | Q9HY23 | Positive | 1495470 - 1495835 | 12790.1 |
| lysr family transcriptional regulator | ALO56_02943 | Not Available | Negative | 1495850 - 1496776 | 34423.3 |
| ferredoxin--nadp reductase | ALO56_02944 | Not Available | Positive | 1496900 - 1497679 | 29668.5 |
| uncharacterized protein | ALO56_02945 | Q9RPT0 | Negative | 1497729 - 1498436 | 25880.2 |
| uncharacterized protein | ALO56_02946 | P33355 | Negative | 1498447 - 1498908 | 17586.4 |
| s4 domain-containing protein | ALO56_02947 | Not Available | Negative | 1498978 - 1499688 | 26496.2 |
| gnat family acetyltransferase | ALO56_02948 | Q7VG78 | Negative | 1499780 - 1500346 | 21465.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









