Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ctp synthase | ALO56_02921 | Q4ZWR0 | Positive | 1472019 - 1473650 | 59719.3 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | ALO56_02922 | Q4ZWQ9 | Positive | 1473667 - 1474512 | 30909.7 |
| enolase | ALO56_02923 | Q4ZWQ8 | Positive | 1474651 - 1475937 | 45397.8 |
| cell division protein ftsb | ALO56_100299 | Q9HXZ6 | Positive | 1476049 - 1476405 | 13501.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | ALO56_02924 | Q48F81 | Positive | 1476421 - 1477131 | 26017.0 |
| regulatory protein lysr | ALO56_02925 | Not Available | Negative | 1477144 - 1478040 | 33991.0 |
| s-glutathione dehydrogenase | ALO56_04952 | P73138 | Positive | 1478082 - 1479257 | 41905.1 |
| esterase | ALO56_02927 | Q8X635 | Positive | 1479317 - 1480165 | 31343.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | ALO56_02928 | Q48F85 | Positive | 1480270 - 1480743 | 16756.3 |
| trna pseudouridine synthase d | ALO56_02929 | Q4ZWQ1 | Positive | 1480740 - 1481798 | 38923.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









