Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | ALO56_04949 | B5Y1J4 | Positive | 1458287 - 1460851 | 93772.2 |
| putative outer membrane protein omph | ALO56_02913 | Q9HXY5 | Positive | 1460897 - 1461400 | 18900.1 |
| udp-3-o-acylglucosamine n-acyltransferase | ALO56_02914 | Q48F69 | Positive | 1461402 - 1462457 | 36590.0 |
| 3-hydroxyacyl- dehydratase fabz | ALO56_02915 | Q48F70 | Positive | 1462567 - 1463007 | 16677.5 |
| acyl---udp-n-acetylglucosamine o-acyltransferase | ALO56_02916 | Q4ZWR6 | Positive | 1463004 - 1463780 | 27926.4 |
| lipid-a-disaccharide synthase | ALO56_02917 | Q886N0 | Positive | 1463783 - 1464925 | 41646.3 |
| ribonuclease hii | ALO56_02918 | Q4ZWR4 | Positive | 1464934 - 1465587 | 23314.6 |
| dna polymerase iii subunit alpha | ALO56_02919 | Q9XDH6 | Positive | 1465651 - 1469172 | 131130.0 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit alpha | ALO56_02920 | Q48F75 | Positive | 1469301 - 1470248 | 35024.2 |
| pp_01212 | ALO56_04950 | Not Available | Positive | 1470416 - 1471753 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









