Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_200182 | Not Available | Negative | 1449146 - 1451233 | 74936.4 |
| hypothetical protein | ALO56_200236 | Not Available | Negative | 1451273 - 1451443 | 6243.91 |
| hypothetical protein | ALO56_200101 | Not Available | Negative | 1451453 - 1451635 | 6783.48 |
| elongation factor t | ALO56_02906 | Q886P2 | Positive | 1451785 - 1452672 | 31534.9 |
| uridylate kinase | ALO56_02907 | Q48F61 | Positive | 1452879 - 1453622 | 26603.6 |
| ribosome recycling factor | ALO56_100036 | C3K5Z8 | Positive | 1453619 - 1454176 | 20109.2 |
| ditrans,polycis-undecaprenyl-diphosphate synthase | ALO56_02908 | Q886N9 | Positive | 1454193 - 1454948 | 28090.5 |
| phosphatidate cytidylyltransferase | ALO56_02909 | Q59640 | Positive | 1454948 - 1455763 | 29048.4 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | ALO56_02910 | Q886N7 | Positive | 1455760 - 1456950 | 42442.4 |
| membrane-associated zinc metalloprotease | ALO56_02911 | Q9HXY3 | Positive | 1457775 - 1458404 | 22416.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









