Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate 5-kinase | ALO56_00930 | Q889F0 | Positive | 1404695 - 1405816 | 39940.3 |
| crea protein | ALO56_00931 | P0AE93 | Positive | 1405846 - 1406316 | 17130.9 |
| 30s ribosomal protein s20 | ALO56_00932 | Q48NK9 | Negative | 1406533 - 1406811 | 10012.3 |
| protein murj -like protein | ALO56_00933 | P0AF17 | Positive | 1407063 - 1408601 | 56281.1 |
| bifunctional riboflavin kinase/fmn adenylyltransferase | ALO56_00934 | P22990 | Positive | 1408734 - 1409684 | 34849.2 |
| isoleucine--trna ligase | ALO56_100477 | Q4ZYJ4 | Positive | 1409681 - 1412512 | 105605.0 |
| isoleucine--trna ligase | ALO56_100254 | Q3K6L6 | Positive | 1412439 - 1413020 | 21650.5 |
| peptidyl-prolyl cis-trans isomerase | ALO56_00935 | P21863 | Positive | 1413013 - 1413489 | 17161.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | ALO56_00936 | Q889E1 | Positive | 1413548 - 1414495 | 34446.9 |
| type iv pilus bioproteinsis protein | ALO56_00937 | Not Available | Negative | 1414502 - 1415002 | 18027.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









