Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase hydrolase | ALO56_03462 | Not Available | Negative | 1396347 - 1397015 | 24642.4 |
| cell division inhibitor | ALO56_100467 | Not Available | Negative | 1397149 - 1397622 | 17786.0 |
| uncharacterized protein | ALO56_03463 | Not Available | Positive | 1398475 - 1399359 | 32618.3 |
| alpha/beta hydrolase domain-containing protein | ALO56_05043 | Q01109 | Negative | 1399417 - 1400367 | 34126.1 |
| hypothetical protein | ALO56_200085 | Not Available | Negative | 1400518 - 1401198 | 25929.5 |
| trans-hexaprenyltranstransferase | ALO56_00926 | P0AD57 | Negative | 1401338 - 1402315 | 35250.4 |
| 50s ribosomal protein l21 | ALO56_00927 | Q48NL4 | Positive | 1402547 - 1402858 | 11503.1 |
| 50s ribosomal protein l27 | ALO56_00928 | Q48NL3 | Positive | 1402892 - 1403167 | 9746.93 |
| hypothetical protein | ALO56_100410 | Not Available | Negative | 1403180 - 1403320 | 5226.32 |
| gtpase obg | ALO56_00929 | Q48NL2 | Positive | 1403384 - 1404607 | 44839.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









