Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_200122 | Q9RR44 | Negative | 58579 - 58914 | 12304.9 |
| hypothetical protein | ALO56_200025 | Not Available | Positive | 59002 - 59268 | 10006.3 |
| hypothetical protein | ALO56_200054 | Not Available | Positive | 59336 - 59620 | 10550.1 |
| branched-chain amino acid abc transporter atp-binding protein | ALO56_01924 | Not Available | Positive | 59765 - 60463 | 25551.4 |
| urease accessory protein ured | ALO56_01925 | Q4ZN11 | Positive | 60512 - 61357 | 31048.1 |
| urease subunit gamma | ALO56_01926 | Q87VP4 | Positive | 61433 - 61735 | 11038.5 |
| n-acetyltransferase gcn5 | ALO56_01927 | A6VCX3 | Positive | 61746 - 62288 | 19699.5 |
| tabtoxin resistance protein | ALO56_01928 | P16966 | Positive | 62302 - 62835 | 19401.3 |
| urease subunit beta | ALO56_01929 | Q4ZN07 | Positive | 62832 - 63140 | 11175.3 |
| urease subunit alpha | ALO56_01930 | Q4ZN06 | Positive | 63223 - 64923 | 60672.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









