Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon storage regulator -like protein | ALO56_03456 | P69920 | Positive | 1390458 - 1390646 | 6953.53 |
| Trna-ser | Not Available | Not Available | Positive | 1390709 - 1390799 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1390909 - 1390985 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1391073 - 1391149 | Not Available |
| uncharacterized protein | ALO56_03457 | Not Available | Negative | 1391193 - 1391687 | 18444.9 |
| magnesium transporter | ALO56_03458 | Q5SMG8 | Positive | 1392012 - 1393454 | 53487.0 |
| alginate biosynthesis transcriptional activator | ALO56_03459 | G8Q5R9 | Negative | 1393603 - 1393920 | 12065.3 |
| uncharacterized protein | ALO56_03460 | Not Available | Negative | 1394645 - 1394887 | 8808.48 |
| Trna-arg | Not Available | Not Available | Positive | 1395203 - 1395279 | Not Available |
| uncharacterized protein | ALO56_03461 | Not Available | Negative | 1395482 - 1396171 | 26559.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









