Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03446 | Q87BI4 | Positive | 1378353 - 1379171 | 30645.4 |
| segregation and condensation protein b | ALO56_03447 | Q83CP9 | Positive | 1379187 - 1379966 | 29698.2 |
| uncharacterized protein | ALO56_03448 | Not Available | Positive | 1380265 - 1380465 | 7517.34 |
| pseudouridine synthase | ALO56_03449 | Q9HZ55 | Positive | 1380651 - 1381874 | 45563.3 |
| amino acid permease | ALO56_03450 | P59737 | Positive | 1382169 - 1383581 | 51027.4 |
| uncharacterized protein | ALO56_03451 | P45388 | Positive | 1383697 - 1384110 | 15234.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | ALO56_03452 | Q885J3 | Negative | 1384168 - 1384680 | 18978.6 |
| threonine aldolase, low-specificity | ALO56_03453 | P58319 | Positive | 1385130 - 1386191 | 37865.8 |
| alanine--trna ligase | ALO56_03454 | Q48G25 | Positive | 1386323 - 1388959 | 94904.5 |
| aspartokinase | ALO56_03455 | Q88EI9 | Positive | 1389053 - 1390285 | 44418.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









