Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03436 | Not Available | Negative | 1369959 - 1370270 | 12058.6 |
| trk system potassium uptake protein | ALO56_05042 | E1V6K4 | Negative | 1370403 - 1371875 | 53733.9 |
| sensor histidine kinase | ALO56_03438 | Q8Z3P2 | Negative | 1372599 - 1373954 | 50564.4 |
| uncharacterized protein | ALO56_03439 | Not Available | Negative | 1374045 - 1374515 | 17837.5 |
| dna-binding response regulator | ALO56_03440 | P0AE89 | Negative | 1374636 - 1375313 | 24985.1 |
| uncharacterized protein | ALO56_03441 | Not Available | Negative | 1375321 - 1375728 | 15049.2 |
| uncharacterized protein | ALO56_03442 | P0AB56 | Negative | 1375884 - 1376183 | 10447.5 |
| putative intracellular septation protein a | ALO56_03443 | Q48FZ3 | Negative | 1376185 - 1376820 | 23961.9 |
| phosphoesterase php, n-terminal:php, c-terminal | ALO56_03444 | P44176 | Positive | 1376847 - 1377710 | 31109.0 |
| sua5/ycio/yrdc/ywlc family protein | ALO56_03445 | P0AFR5 | Positive | 1377724 - 1378353 | 22846.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









