Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aliphatic sulfonate abc transporter substrate-binding protein | ALO56_03427 | Not Available | Negative | 1360194 - 1361183 | 35097.2 |
| rhodanese-like domain-containing protein | ALO56_05040 | Not Available | Negative | 1361366 - 1362982 | 58907.1 |
| uncharacterized protein | ALO56_03429 | Q9I0N5 | Negative | 1362949 - 1363560 | 22527.3 |
| lysr family transcriptional regulator | ALO56_03430 | P77744 | Positive | 1363761 - 1364666 | 32603.8 |
| fmnh2-dependent methanesulfonate sulfonatase | ALO56_03431 | Q9I1C2 | Negative | 1364730 - 1365818 | 39930.0 |
| sulfonate abc transporter permease | ALO56_03432 | Not Available | Positive | 1366042 - 1366932 | 32544.6 |
| aliphatic sulfonates import atp-binding protein ssub | ALO56_03433 | Q885N4 | Positive | 1366935 - 1367768 | 30222.6 |
| putative selenoprotein | ALO56_05041 | Not Available | Positive | 1367820 - 1368122 | 11183.3 |
| drug/metabolite exporter family transporter | ALO56_03434 | Not Available | Negative | 1368116 - 1368991 | 30433.4 |
| ser/thr protein phosphatase | ALO56_03435 | Not Available | Positive | 1369125 - 1369952 | 31698.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









