Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_00191 | Not Available | Positive | 1315090 - 1315419 | 11747.6 |
| uncharacterized protein | ALO56_00192 | Not Available | Negative | 1315429 - 1315920 | 19030.0 |
| tonb-dependent siderophore receptor | ALO56_00193 | Not Available | Positive | 1316773 - 1319211 | 87414.0 |
| mrna 3''''-end processing factor | ALO56_03582 | B1ZZL9 | Positive | 1319550 - 1320593 | 38245.9 |
| atp-dependent dna ligase | ALO56_03583 | Q1II25 | Positive | 1320590 - 1322293 | 63860.2 |
| amino acid abc transporter substrate-binding protein | ALO56_03584 | P02911 | Positive | 1322628 - 1323410 | 27846.4 |
| amino acid abc transporter permease | ALO56_03585 | Not Available | Positive | 1323495 - 1324223 | 26669.0 |
| succinylglutamate desuccinylase/aspartoacylase | ALO56_03586 | Not Available | Positive | 1324945 - 1326063 | 40672.7 |
| amino acid abc transporter atp-binding protein | ALO56_03587 | P02915 | Positive | 1326073 - 1326837 | 28158.1 |
| marr family transcriptional regulator | ALO56_03404 | O34777 | Negative | 1327303 - 1327776 | 17154.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









