Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALO56_02873 | Q02876 | Positive | 1290673 - 1291608 | 34330.9 |
| antibiotic biosynthesis monooxygenase | ALO56_02874 | Not Available | Positive | 1291744 - 1292370 | 23344.5 |
| amidohydrolase | ALO56_02875 | O34355 | Positive | 1292375 - 1294354 | 72782.8 |
| isochorismatase family protein | ALO56_02876 | P21367 | Positive | 1294424 - 1295053 | 22812.2 |
| uncharacterized protein | ALO56_02877 | Not Available | Positive | 1295574 - 1295891 | 12018.1 |
| hypothetical protein | ALO56_04943 | Not Available | Positive | 1296366 - 1296950 | 22086.9 |
| putative lipoprotein | ALO56_02879 | Not Available | Positive | 1296968 - 1297507 | 20270.3 |
| cyclic pyranopterin monophosphate synthase | ALO56_02880 | Q48HV8 | Negative | 1297521 - 1298519 | 37102.9 |
| sodium/hydrogen exchanger family protein | ALO56_04944 | Not Available | Negative | 1298754 - 1300163 | 50697.6 |
| uncharacterized protein | ALO56_03694 | P9WL94 | Positive | 1300635 - 1301801 | 43862.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









