Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | ALO56_00652 | Not Available | Positive | 48546 - 49262 | 26171.0 |
| short chain dehydrogenase/reductase family oxidoreductase | ALO56_00653 | Q1QU27 | Positive | 49912 - 50781 | 31416.4 |
| putative n-acyl-d-glucosamine 2-epimerase | ALO56_100052 | P29954 | Negative | 50782 - 51996 | 45061.2 |
| hupe/urej protein | ALO56_00654 | P27650 | Negative | 52193 - 52765 | 18928.6 |
| urease accessory protein ureg | ALO56_00655 | Q48DC7 | Negative | 52788 - 53405 | 22026.5 |
| urease accessory protein uref | ALO56_00656 | Q48DC8 | Negative | 53427 - 54101 | 24936.8 |
| urease accessory protein uree | ALO56_00657 | Q87VM7 | Negative | 54098 - 54616 | 19456.0 |
| tetr family transcriptional regulator | ALO56_00658 | A7ML90 | Negative | 54992 - 55624 | 23406.6 |
| unknown protein sequence | ALO56_00659 | Not Available | Negative | 55715 - 55852 | 5183.23 |
| asma family protein | ALO56_00660 | P37645 | Positive | 56098 - 58164 | 74151.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









