Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| divalent metal cation transporter mnth | ALO56_02863 | Q9RPF3 | Positive | 1278487 - 1279752 | 44571.5 |
| mfs transporter | ALO56_02864 | P31679 | Positive | 1279816 - 1281273 | 53166.4 |
| uncharacterized protein | ALO56_02865 | Not Available | Negative | 1281589 - 1281792 | 7280.19 |
| uncharacterized protein | ALO56_02866 | Not Available | Negative | 1281856 - 1282350 | 18002.2 |
| efflux protein, lyse family | ALO56_02867 | A8A390 | Positive | 1282435 - 1283136 | 25281.4 |
| arac family transcriptional regulator | ALO56_04942 | Not Available | Negative | 1283147 - 1284322 | 44277.7 |
| uncharacterized protein | ALO56_02870 | P39315 | Negative | 1284493 - 1285350 | 30048.3 |
| putative transcriptional regulator | ALO56_100174 | P0ACN2 | Positive | 1285438 - 1285878 | 16057.5 |
| penicillin-binding protein | ALO56_02871 | P0AD67 | Positive | 1285981 - 1287903 | 71874.8 |
| pyruvate dehydrogenase | ALO56_02872 | P07003 | Positive | 1288163 - 1289881 | 61401.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









