Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase/reductase family oxidoreductase | ALO56_02854 | P39482 | Positive | 1265828 - 1266628 | 28317.8 |
| glycosyl hydrolase family protein | ALO56_02855 | Q10211 | Positive | 1266621 - 1268447 | 69024.5 |
| uncharacterized protein | ALO56_02856 | Not Available | Negative | 1268473 - 1269903 | 52242.5 |
| uncharacterized protein | ALO56_02857 | Not Available | Negative | 1270000 - 1270959 | 34432.4 |
| short chain dehydrogenase | ALO56_02858 | A0R610 | Negative | 1270956 - 1271696 | 26524.6 |
| fad linked oxidase domain-containing protein | ALO56_02859 | P9WJF0 | Negative | 1271693 - 1273009 | 48686.4 |
| uncharacterized protein | ALO56_02860 | P55585 | Negative | 1273006 - 1274457 | 53690.0 |
| anaerobic nitric oxide reductase transcription regulator | ALO56_02861 | Q9K4V0 | Positive | 1274817 - 1276370 | 57355.3 |
| uncharacterized protein | ALO56_02862 | Not Available | Positive | 1276483 - 1276707 | 8703.37 |
| major facilitator transporter | ALO56_101458 | Not Available | Negative | 1276726 - 1278231 | 55183.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









