Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide/dipeptide abc transporter atp-binding protein-like protein | ALO56_02835 | Q53193 | Negative | 1243279 - 1244280 | 36376.6 |
| peptide abc transporter permease | ALO56_02836 | A0A0H2ZFV0 | Negative | 1244297 - 1245205 | 32309.7 |
| binding-protein dependent transport system inner membrane protein | ALO56_02837 | Q8FJK9 | Negative | 1245214 - 1246131 | 33099.4 |
| peptide abc transporter periplasmic peptide-binding protein | ALO56_02838 | Q5PGP4 | Negative | 1246200 - 1247720 | 56403.9 |
| regulatory protein lysr | ALO56_02839 | Not Available | Positive | 1247921 - 1248829 | 33305.2 |
| gtp cyclohydrolase fole2 | ALO56_02840 | Q48HN1 | Positive | 1249010 - 1249915 | 33070.3 |
| carbonic anhydrase-like protein | ALO56_02841 | Q57752 | Positive | 1249927 - 1250487 | 19968.7 |
| membrane protein | ALO56_02842 | Not Available | Positive | 1250580 - 1251746 | 43854.7 |
| nickel transport system substrate-binding protein | ALO56_02843 | Not Available | Negative | 1252019 - 1252747 | 26118.4 |
| tonb-dependent siderophore receptor | ALO56_04939 | Not Available | Negative | 1252772 - 1255051 | 84103.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









