Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO56_200095 | Not Available | Positive | 1228595 - 1230688 | 78032.9 |
| hypothetical protein | ALO56_200195 | Not Available | Positive | 1230958 - 1231863 | 32353.1 |
| hypothetical protein | ALO56_200198 | Not Available | Negative | 1231958 - 1232482 | 18875.3 |
| hypothetical protein | ALO56_200051 | P43676 | Negative | 1232629 - 1234245 | 56911.9 |
| hypothetical protein | ALO56_200165 | Not Available | Negative | 1234378 - 1235397 | 38370.2 |
| hypothetical protein | ALO56_200033 | Not Available | Negative | 1235685 - 1236467 | 27698.2 |
| uncharacterized protein | ALO56_01557 | Not Available | Positive | 1237146 - 1237898 | 26756.4 |
| putative transporter-like membrane protein | ALO56_01558 | P69340 | Negative | 1237870 - 1239633 | 64741.4 |
| peptidase, m20/m25/m40 family protein | ALO56_02833 | P06621 | Negative | 1239703 - 1240851 | 39850.5 |
| peptide abc transporter atp-binding protein | ALO56_02834 | Q53194 | Negative | 1242272 - 1243282 | 36945.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









