Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01547 | Not Available | Negative | 1213637 - 1213966 | 11420.6 |
| uncharacterized protein | ALO56_01548 | Q9JYT7 | Negative | 1216936 - 1217607 | 24899.8 |
| iron-sulfur cluster binding protein | ALO56_01549 | A7Z901 | Negative | 1217604 - 1219067 | 54098.3 |
| uncharacterized protein | ALO56_01550 | A4IK96 | Negative | 1219064 - 1219900 | 30822.6 |
| glycolate permease | ALO56_01551 | Q46839 | Negative | 1219984 - 1221675 | 59340.9 |
| gntr family transcriptional regulator | ALO56_01552 | P0ACM1 | Positive | 1222074 - 1222841 | 28948.6 |
| hypothetical protein | ALO56_200169 | P33951 | Negative | 1222997 - 1224661 | 61526.0 |
| hypothetical protein | ALO56_200047 | Not Available | Negative | 1224725 - 1225585 | 31477.9 |
| hypothetical protein | ALO56_200011 | Not Available | Negative | 1225643 - 1226923 | 47560.9 |
| hypothetical protein | ALO56_200237 | M1VV65 | Negative | 1226920 - 1228263 | 49450.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









