Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | ALO56_00501 | Not Available | Positive | 1179019 - 1180710 | 62308.1 |
| glycosyl transferase family protein | ALO56_100055 | Not Available | Positive | 1180703 - 1181437 | 27799.1 |
| lysophospholipid acyltransferase | ALO56_101336 | Not Available | Positive | 1181497 - 1182125 | 23775.2 |
| abc transporter | ALO56_01531 | Not Available | Positive | 1182498 - 1183328 | 30404.1 |
| uncharacterized protein | ALO56_05251 | Not Available | Negative | 1189039 - 1191042 | 73400.8 |
| uncharacterized protein | ALO56_01533 | Not Available | Negative | 1191074 - 1191427 | 12970.3 |
| family 2 glycosyl transferase | ALO56_01534 | Not Available | Negative | 1191417 - 1192415 | 36672.8 |
| uncharacterized protein | ALO56_01535 | Not Available | Positive | 1192646 - 1193266 | 23743.4 |
| methyl-accepting chemotaxis protein | ALO56_04675 | Not Available | Negative | 1193345 - 1195393 | 74048.6 |
| methyl-accepting chemotaxis protein | ALO56_01537 | Q88KP1 | Positive | 1195638 - 1197518 | 66892.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









