Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit i | ALO56_02150 | Q9WWR2 | Positive | 1168242 - 1170254 | 74324.0 |
| cytochrome o ubiquinol oxidase subunit iii | ALO56_02151 | Q9WWR3 | Positive | 1170257 - 1170889 | 23170.3 |
| protoheme ix farnesyltransferase | ALO56_02152 | Q887G7 | Positive | 1171232 - 1172119 | 32392.6 |
| glycosyl transferase family protein | ALO56_02153 | Q57022 | Positive | 1172398 - 1173297 | 34041.0 |
| acetyltransferase | ALO56_02154 | P26838 | Positive | 1173331 - 1173978 | 24129.2 |
| branched-chain-amino-acid aminotransferase | ALO56_02155 | P54689 | Positive | 1174099 - 1175133 | 37533.7 |
| para family protein | ALO56_00498 | Q60283 | Negative | 1175338 - 1176117 | 29061.8 |
| uncharacterized protein | ALO56_00499 | Not Available | Positive | 1176469 - 1177188 | 26964.8 |
| phospholipid/glycerol acyltransferase | ALO56_100113 | Not Available | Positive | 1177164 - 1177976 | 30144.8 |
| intracellular septation protein a | ALO56_00500 | Not Available | Positive | 1178472 - 1179017 | 20076.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









