Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | ALO56_02141 | Not Available | Positive | 1157099 - 1157683 | 19724.3 |
| pili assembly chaperone: pili assembly chaperone | ALO56_02142 | P33409 | Positive | 1157745 - 1158491 | 26788.4 |
| outer membrane usher protein fimd | ALO56_04824 | Not Available | Positive | 1158409 - 1161135 | 98718.0 |
| fimbral chaperone protein | ALO56_02144 | Q8X5E4 | Positive | 1161132 - 1161902 | 28051.6 |
| uncharacterized protein | ALO56_02145 | Not Available | Positive | 1161904 - 1162908 | 36043.3 |
| uncharacterized protein | ALO56_02146 | Not Available | Positive | 1163002 - 1163232 | 8177.51 |
| uncharacterized protein | ALO56_02147 | Not Available | Negative | 1163234 - 1163986 | 27042.1 |
| uncharacterized protein | ALO56_02148 | Not Available | Negative | 1164084 - 1164407 | 11609.9 |
| disulfide bond formation protein b | ALO56_02149 | Q4ZXC8 | Positive | 1166324 - 1166833 | 18292.2 |
| cytochrome o ubiquinol oxidase subunit ii | ALO56_100290 | Not Available | Positive | 1167201 - 1168238 | 38428.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









