Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02721 | P35158 | Positive | 34840 - 36081 | 43759.6 |
| uncharacterized protein | ALO56_02722 | Not Available | Negative | 36086 - 37267 | 43634.1 |
| insulinase-like:peptidase m16, c-terminal | ALO56_04912 | P45181 | Negative | 37367 - 38782 | 53314.6 |
| na/pi cotransporter ii-like protein | ALO56_02724 | P0AF43 | Negative | 38804 - 40171 | 49424.2 |
| nh synthetase | ALO56_00646 | Q48NY2 | Negative | 40578 - 41405 | 29977.7 |
| nicotinate phosphoribosyltransferase | ALO56_00647 | Q48NY1 | Negative | 41432 - 42655 | 46765.8 |
| lysr family transcriptional regulator | ALO56_04481 | Not Available | Negative | 42755 - 43660 | 34475.4 |
| branched-chain amino acid abc transporter substrate-binding protein | ALO56_00649 | Q9HUQ0 | Positive | 44151 - 45287 | 40374.9 |
| high-affinity branched-chain amino acid abc transporter, permease protein brad | ALO56_00650 | P21627 | Positive | 45456 - 46373 | 32777.3 |
| high-affinity branched-chain amino acid abc transporter permease brae | ALO56_00651 | Not Available | Positive | 46376 - 47677 | 46706.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









