Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALO41_00051 | Q9I6Z9 | Positive | 811810 - 812730 | 34093.9 |
| xanthine/uracil permease family protein | ALO41_00052 | P0AGN1 | Positive | 812916 - 814313 | 48750.9 |
| transcriptional regulator, tetr family | ALO41_100040 | P0ACU3 | Positive | 814379 - 815071 | 25964.2 |
| thymidylate synthase | ALO41_00053 | P32438 | Positive | 815104 - 815697 | 21429.6 |
| abc transporter, atp-binding protein | ALO41_00054 | Not Available | Positive | 816220 - 817773 | 55523.0 |
| abc transporter, permease protein | ALO41_00055 | D4GPW2 | Positive | 817785 - 818885 | 39416.6 |
| ribose abc transport system, permease protein | ALO41_00056 | Not Available | Positive | 818885 - 819811 | 32524.3 |
| short chain dehydrogenase | ALO41_00057 | Not Available | Positive | 820019 - 820744 | 25707.8 |
| hydroxydechloroatrazine ethylaminohydrolase | ALO41_00058 | Q9I6Z0 | Positive | 820868 - 822223 | 48790.9 |
| cpaa protein | ALO41_04566 | P55471 | Negative | 822335 - 823459 | 40007.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








