Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prophage pspph01, site-specific recombinase phage integrase family protein | ALO41_02797 | Not Available | Positive | 797101 - 798282 | 44981.6 |
| uncharacterized protein | ALO41_02798 | Not Available | Negative | 799361 - 800428 | 40199.2 |
| uncharacterized protein | ALO41_02799 | Not Available | Negative | 800951 - 802111 | 43076.3 |
| putative dna primase | ALO41_04892 | Not Available | Negative | 803129 - 803575 | 16534.6 |
| site-specific recombinase, phage integrase family protein | ALO41_05158 | A4VGW3 | Positive | 803856 - 804843 | 37111.8 |
| pap2 superfamily protein | ALO41_03196 | Not Available | Positive | 804961 - 805665 | 26937.7 |
| two-component system sensor protein | ALO41_100486 | P0A4I7 | Negative | 805756 - 807057 | 48292.9 |
| o-antigen abc transporter permease | ALO41_03299 | Not Available | Positive | 807338 - 808305 | 35855.6 |
| methylmalonate-semialdehyde dehydrogenase | ALO41_100032 | Not Available | Negative | 808754 - 810295 | 55434.6 |
| beta alanine--pyruvate transaminase | ALO41_00050 | P28269 | Negative | 810352 - 811698 | 48585.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








