Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| myo-inositol 2-dehydrogenase | ALO41_03646 | O32223 | Negative | 732527 - 733546 | 36933.6 |
| iolh protein | ALO41_05437 | P42418 | Negative | 733613 - 734515 | 34712.1 |
| inositol 2-dehydrogenase | ALO41_03648 | Q48GY3 | Negative | 734525 - 735541 | 36816.3 |
| iold protein | ALO41_03649 | Q5KYR0 | Negative | 735603 - 737540 | 70287.9 |
| ioll protein | ALO41_05440 | Not Available | Negative | 737599 - 739119 | 56326.4 |
| methylmalonate-semialdehyde dehydrogenase | ALO41_03651 | Q9I702 | Negative | 738465 - 739967 | 53818.9 |
| 5-keto-2-deoxygluconokinase b | ALO41_03652 | Q5KYR2 | Negative | 739996 - 740805 | 29782.0 |
| ap endonuclease | ALO41_03653 | P49304 | Negative | 740819 - 741724 | 33128.5 |
| carbohydrate kinase, pfkb | ALO41_05441 | Q5KYR3 | Negative | 741771 - 743732 | 72310.7 |
| sis domain-containing protein | ALO41_03655 | Not Available | Positive | 744001 - 744909 | 33907.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








