Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain fatty acid transporter | ALO41_03618 | P76460 | Positive | 698509 - 699927 | 50572.5 |
| antibiotic biosynthesis monooxygenase family protein | ALO41_03619 | P54563 | Negative | 699931 - 700257 | 12327.4 |
| uncharacterized protein | ALO41_03620 | Q5WB43 | Negative | 700254 - 700988 | 26338.4 |
| d-isomer specific 2-hydroxyacid dehydrogenase family protein | ALO41_03621 | Not Available | Negative | 701099 - 702037 | 32670.4 |
| glycerophosphoryl diester phosphodiesterase | ALO41_03622 | P37965 | Positive | 702301 - 703458 | 42126.5 |
| tonb-dependent siderophore receptor | ALO41_05431 | Q05202 | Negative | 703503 - 705689 | 78589.8 |
| phosphatidylserine synthase | ALO41_03624 | P23830 | Positive | 705938 - 707281 | 50936.1 |
| atp-dependent dna ligase | ALO41_05432 | Q9I1X7 | Negative | 707344 - 709968 | 96315.2 |
| non--like proteinous end joining protein ku | ALO41_03626 | Q87ZG4 | Negative | 709965 - 710918 | 35656.6 |
| hypothetical protein | ALO41_101519 | Not Available | Positive | 710898 - 711026 | 5116.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








