Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase, group 1 family protein | ALO41_03611 | P26402 | Positive | 688846 - 689970 | 41542.1 |
| mannosyltransferase | ALO41_03612 | Not Available | Positive | 690044 - 691273 | 44857.4 |
| capsular polysaccharide biosynthesis protein | ALO41_03613 | P71241 | Positive | 691286 - 692695 | 53243.2 |
| polysaccharide export protein | ALO41_100090 | P58597 | Positive | 692708 - 693865 | 42357.4 |
| fmn reductase | ALO41_03614 | O85762 | Positive | 694115 - 694696 | 21094.4 |
| amino acid transporter lyse | ALO41_05430 | Q57L56 | Negative | 694704 - 695342 | 23157.0 |
| hypothetical protein | ALO41_103062 | Not Available | Positive | 695442 - 695753 | 11429.1 |
| lysr family transcriptional regulator | ALO41_03616 | P0ACR7 | Negative | 695807 - 696697 | 32477.7 |
| 3-oxoacid coa-transferase | ALO41_100005 | P42315 | Positive | 696743 - 697528 | 28638.7 |
| succinyl-coa:3-ketoacid-coenzyme a transferase subunit b | ALO41_03617 | B0RVK3 | Positive | 697570 - 698226 | 23162.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








