Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase qsec | ALO41_00357 | Q57QC4 | Positive | 676875 - 678248 | 51034.7 |
| l-pipecolate oxidase | ALO41_100147 | P44732 | Negative | 678261 - 679547 | 45707.3 |
| aldehyde dehydrogenase | ALO41_04638 | P46562 | Negative | 679590 - 681155 | 56505.3 |
| 4-aminobutyrate aminotransferase | ALO41_00358 | Q88RB9 | Positive | 681334 - 682581 | 44360.5 |
| uncharacterized protein | ALO41_00359 | P76097 | Positive | 682605 - 683984 | 51052.3 |
| tyrosine-protein kinase | ALO41_100066 | Q48452 | Positive | 684136 - 685904 | 65583.5 |
| transcription antitermination protein rfah | ALO41_03608 | Not Available | Positive | 685958 - 686470 | 19623.7 |
| glycosyl transferase, group 2 family protein | ALO41_03609 | Not Available | Positive | 686556 - 686696 | 5069.22 |
| glycosyl transferase, group 2 family protein | ALO41_03610 | Not Available | Positive | 686730 - 687557 | 31125.9 |
| glycoside hydrolase family protein | ALO41_100781 | Q58577 | Positive | 687554 - 688771 | 45321.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








