Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd efflux transporter | ALO41_100600 | B7MWY8 | Positive | 653242 - 656346 | 110740.0 |
| dna-binding heavy metal response regulator | ALO41_02137 | Not Available | Positive | 656357 - 657034 | 25233.7 |
| heavy metal sensor histidine kinase | ALO41_02138 | Q8FK37 | Positive | 657024 - 658388 | 50356.6 |
| ggdef domain-containing protein | ALO41_02139 | Not Available | Positive | 658507 - 660126 | 60488.6 |
| aldehyde dehydrogenase | ALO41_100667 | Not Available | Negative | 660195 - 660776 | 21227.2 |
| uncharacterized protein | ALO41_02140 | P0AD41 | Positive | 660892 - 661131 | 8963.02 |
| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase | ALO41_02141 | P00885 | Negative | 661259 - 661933 | 23827.0 |
| 6-phosphogluconolactonase, eukaryotic type | ALO41_100159 | Q9EV79 | Negative | 661951 - 662664 | 25218.5 |
| glucose-6-phosphate 1-dehydrogenase | ALO41_02142 | O68282 | Negative | 662651 - 664120 | 55525.4 |
| dna-binding transcriptional regulator hexr | ALO41_02143 | Q88P32 | Positive | 664340 - 665206 | 31364.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








