Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative head completion/stabilization protein | ALO41_01596 | Not Available | Positive | 5841859 - 5842320 | 17045.3 |
| Putative tail protein | ALO41_01597 | Not Available | Positive | 5842317 - 5842760 | 16553.5 |
| Virion morphogenesis family protein | ALO41_01598 | Not Available | Positive | 5842750 - 5843418 | 25190.5 |
| Putative tail sheath protein | ALO41_01599 | P51725 | Positive | 5843433 - 5844545 | 39141.1 |
| Putative tail tube protein | ALO41_01600 | P51726 | Positive | 5844549 - 5845001 | 15887.8 |
| Dksa/trar family c4-type zinc finger protein | ALO41_01601 | Not Available | Positive | 5845001 - 5845210 | 7511.1 |
| uncharacterized protein | ALO41_01602 | Not Available | Positive | 5845210 - 5845416 | 7370.15 |
| Lysozyme | ALO41_01603 | Not Available | Positive | 5845413 - 5845940 | 18521.2 |
| Lysis protein | ALO41_102682 | Not Available | Positive | 5845928 - 5846416 | 17986.6 |
| Hypothetical protein | ALO41_01604 | Not Available | Positive | 5846450 - 5846740 | 10564.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








