Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macrolide efflux protein | ALO41_01676 | Not Available | Positive | 600791 - 602098 | 46760.3 |
| amidinotransferase family protein | ALO41_100616 | Q9RBU1 | Positive | 602993 - 604204 | 46935.4 |
| nikkomycin biosynthesis domain protein | ALO41_01677 | Not Available | Positive | 604291 - 605544 | 46572.9 |
| uncharacterized protein | ALO41_01678 | Not Available | Positive | 605597 - 606841 | 46416.6 |
| hypothetical protein | ALO41_102818 | Not Available | Positive | 607016 - 607198 | 6703.18 |
| large exoprotein s involved in heme utilization or adhesion | ALO41_100706 | Q9ZFG9 | Negative | 607464 - 609548 | 71860.6 |
| uncharacterized protein | ALO41_01679 | Not Available | Positive | 609879 - 610067 | 6993.13 |
| laci family transcriptional regulator | ALO41_01680 | P07760 | Negative | 610150 - 610521 | 13099.3 |
| autotransporter | ALO41_04928 | Not Available | Negative | 611132 - 613474 | 80874.9 |
| putative autotransporter | ALO41_04929 | Not Available | Negative | 613471 - 614193 | 24451.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








