Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium and cobalt efflux protein corc | ALO41_100044 | Q9KTE3 | Negative | 556019 - 556861 | 31368.5 |
| endoribonuclease ybey | ALO41_03114 | Q48DN6 | Negative | 556867 - 557367 | 18838.8 |
| phoh family protein | ALO41_03115 | P0A9K5 | Negative | 557360 - 558382 | 38368.1 |
| hypothetical protein | ALO41_101180 | Not Available | Positive | 558293 - 558502 | 8052.97 |
| trna-2-methylthio-n-dimethylallyladenosine synthase | ALO41_05305 | Q48DN8 | Negative | 558559 - 559887 | 49444.8 |
| uncharacterized protein | ALO41_03117 | Not Available | Positive | 560018 - 560344 | 12490.2 |
| uncharacterized protein | ALO41_03118 | Not Available | Negative | 560378 - 560926 | 19754.6 |
| hypothetical protein | ALO41_101932 | Not Available | Negative | 560992 - 561165 | 6449.09 |
| glutamate-1-semialdehyde 2,1-aminomutase | ALO41_03119 | Q48DP1 | Negative | 561223 - 562506 | 45351.5 |
| thiamine-phosphate synthase | ALO41_03120 | Q48DP2 | Negative | 562778 - 563395 | 21969.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








