Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| octanoyltransferase | ALO41_03104 | Q48DM5 | Positive | 544912 - 545568 | 23677.4 |
| lipoyl synthase | ALO41_03105 | Q48DM6 | Positive | 545561 - 546568 | 37666.9 |
| uncharacterized protein | ALO41_03106 | Not Available | Negative | 546666 - 548003 | 48131.8 |
| uncharacterized protein | ALO41_03107 | Not Available | Negative | 548084 - 548239 | 5816.02 |
| dna polymerase iii, delta subunit | ALO41_03108 | Not Available | Negative | 548519 - 549556 | 37363.2 |
| lps-assembly lipoprotein lpte | ALO41_03109 | Not Available | Negative | 549598 - 550203 | 22170.3 |
| leucine--trna ligase | ALO41_05303 | Q48DN1 | Negative | 550299 - 552905 | 96933.3 |
| uncharacterized protein | ALO41_03111 | Not Available | Positive | 553217 - 553546 | 12223.7 |
| uncharacterized protein | ALO41_03112 | P44292 | Positive | 553651 - 554421 | 28244.5 |
| apolipoprotein n-acyltransferase | ALO41_05304 | Q87VX7 | Negative | 554470 - 555996 | 56296.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








