Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head decoration protein d | ALO41_01129 | Not Available | Negative | 5648298 - 5648642 | 11946.3 |
| Head maturation protease | ALO41_01130 | Not Available | Negative | 5648639 - 5649784 | 40593.5 |
| Portal protein | ALO41_102233 | Not Available | Negative | 5649781 - 5650527 | 27608.7 |
| uncharacterized protein | ALO41_01131 | Not Available | Negative | 5651259 - 5651465 | 7600.12 |
| Large terminase subunit | ALO41_01132 | Not Available | Negative | 5651533 - 5652513 | 37069.0 |
| Large terminase subunit | ALO41_01133 | P03708 | Negative | 5652515 - 5654536 | 75596.7 |
| Major capsid protein | ALO41_01593 | P25477 | Positive | 5839249 - 5839775 | 19368.8 |
| Putative terminase endonuclease subunit | ALO41_01594 | Not Available | Positive | 5839772 - 5840494 | 27264.5 |
| prophage psssm-01, orf22 | ALO41_101306 | Not Available | Negative | 5841132 - 5841428 | 11117.6 |
| uncharacterized protein | ALO41_01595 | Not Available | Negative | 5841530 - 5841823 | 10694.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








