Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| binding-protein dependent transport system inner membrane protein | ALO41_100200 | P56343 | Positive | 6113034 - 6113903 | 30097.6 |
| abc transporter permease | ALO41_03735 | Q08382 | Positive | 6113915 - 6114694 | 28100.5 |
| abc transporter atp-binding protein | ALO41_03736 | Q8U6M1 | Positive | 6114691 - 6115722 | 37070.0 |
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | ALO41_03737 | Not Available | Positive | 6115747 - 6116580 | 31108.2 |
| tat pathway signal sequence domain-containing protein | ALO41_05479 | Not Available | Negative | 6116855 - 6118825 | 71060.1 |
| helix-turn-helix, fis-type:molybdenum-binding protein | ALO41_05480 | P58497 | Negative | 6118853 - 6119911 | 37691.0 |
| competence protein comf | ALO41_03740 | Q8Z222 | Negative | 6119764 - 6120498 | 27671.7 |
| biotin synthase | ALO41_03741 | Q4ZMA8 | Positive | 6120588 - 6121646 | 38646.3 |
| 8-amino-7-oxononanoate synthase | ALO41_03742 | Q48CS2 | Positive | 6121711 - 6122901 | 42437.8 |
| bioh protein | ALO41_03743 | C5BMZ8 | Positive | 6122894 - 6123625 | 25826.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








