Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine aminotransferase | ALO41_02413 | Q07907 | Negative | 5972424 - 5973677 | 44046.7 |
| uncharacterized protein | ALO41_02414 | Not Available | Negative | 5973674 - 5974231 | 20333.4 |
| uncharacterized protein | ALO41_02415 | Not Available | Negative | 5974228 - 5975358 | 41492.0 |
| ornithine decarboxylase | ALO41_02416 | Not Available | Positive | 5975853 - 5976968 | 40916.1 |
| dmt superfamily multiple drug efflux pump | ALO41_02417 | Q9X2N9 | Positive | 5976969 - 5977328 | 12611.0 |
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | ALO41_02418 | D5V0N9 | Negative | 5977360 - 5978157 | 29577.5 |
| alkylhydroperoxidase | ALO41_05108 | Not Available | Negative | 5978278 - 5978931 | 23763.5 |
| peptide abc transporter periplasmic peptide-binding protein | ALO41_05109 | P23847 | Negative | 5979463 - 5981049 | 57780.6 |
| peptide abc transporter, atp-binding protein | ALO41_05111 | Not Available | Negative | 5981079 - 5982269 | 44230.8 |
| peptide abc transporter atp-binding protein | ALO41_02422 | Q8YBN6 | Negative | 5982082 - 5983080 | 35668.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








