Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ALO41_02261 | Q03027 | Negative | 480361 - 481710 | 50149.0 |
| type i secretion membrane fusion protein, hlyd | ALO41_02262 | Q03025 | Negative | 481712 - 483049 | 48687.2 |
| type i secretion system atpase, prtd | ALO41_02263 | Q03024 | Negative | 483046 - 484842 | 64364.4 |
| serralysin | ALO41_02264 | Q1ID47 | Negative | 485364 - 486137 | 26015.8 |
| serralysin | ALO41_02265 | A0A0C5CJR8 | Negative | 486300 - 486488 | 6478.26 |
| putative membrane protein | ALO41_02266 | Q03268 | Negative | 487264 - 487971 | 25596.8 |
| Trna-ser | Not Available | Not Available | Positive | 488058 - 488145 | Not Available |
| uncharacterized protein | ALO41_02267 | Not Available | Positive | 488297 - 490840 | 93629.9 |
| atp-dependent helicase | ALO41_02268 | P32639 | Positive | 492107 - 494356 | 82354.9 |
| lysr family transcriptional regulator | ALO41_05076 | Not Available | Positive | 494399 - 494893 | 18147.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








