Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO41_01771 | Not Available | Negative | 5757605 - 5757850 | 9331.15 |
| tray protein | ALO41_04947 | Not Available | Negative | 5757954 - 5758346 | 13405.7 |
| trax protein | ALO41_01772 | Not Available | Negative | 5760129 - 5760731 | 22421.4 |
| unknown protein sequence | ALO41_03242 | Not Available | Negative | 5762010 - 5762162 | 5797.01 |
| transcriptional regulator mext | ALO41_05342 | Q9EXL7 | Positive | 5762884 - 5764650 | 64829.5 |
| putative phirv1 integrase | ALO41_101158 | Not Available | Positive | 5764762 - 5765949 | 44585.5 |
| is52, transposase | ALO41_04920 | P76071 | Negative | 5765961 - 5766773 | 29880.6 |
| uncharacterized protein | ALO41_03899 | Not Available | Negative | 5766906 - 5767877 | 35886.1 |
| uncharacterized protein | ALO41_03900 | Not Available | Negative | 5767864 - 5769534 | 61398.8 |
| rhs element vgr protein | ALO41_03901 | Not Available | Negative | 5769572 - 5770210 | 21954.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








