Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO41_01764 | Not Available | Negative | 5749667 - 5749927 | 9797.64 |
| gntr family transcriptional regulator | ALO41_01765 | Not Available | Negative | 5749973 - 5750410 | 16487.0 |
| uncharacterized protein | ALO41_01766 | Not Available | Negative | 5750589 - 5750930 | 12790.1 |
| uncharacterized protein | ALO41_01767 | Not Available | Negative | 5750976 - 5751170 | 7625.32 |
| uncharacterized protein | ALO41_01768 | Not Available | Negative | 5751173 - 5751595 | 16093.8 |
| type iii effector hopav1 | ALO41_100647 | Q5ZYC6 | Negative | 5751623 - 5753938 | 84661.6 |
| putative trbb protein | ALO41_100693 | Not Available | Negative | 5753925 - 5755010 | 39645.3 |
| pin domain protein | ALO41_100734 | Not Available | Positive | 5755233 - 5755676 | 16038.3 |
| uncharacterized protein | ALO41_01769 | Not Available | Negative | 5755666 - 5756820 | 42763.2 |
| putative surface exclusion protein | ALO41_04946 | Not Available | Negative | 5756961 - 5757611 | 24888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








