Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALO41_00889 | Not Available | Negative | 5721186 - 5722082 | 33959.8 |
| alcohol dehydrogenase, s iii | ALO41_04736 | P73138 | Positive | 5722124 - 5723299 | 41785.8 |
| esterase | ALO41_00891 | Q8X635 | Positive | 5723375 - 5724220 | 31403.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | ALO41_00892 | Q48F85 | Positive | 5724274 - 5724747 | 16781.3 |
| trna pseudouridine synthase d | ALO41_00893 | Q48F86 | Positive | 5724744 - 5725802 | 38860.1 |
| 5'-nucleotidase sure | ALO41_00894 | Q48F87 | Positive | 5725790 - 5726539 | 26641.7 |
| protein-l-isoaspartate o-methyltransferase | ALO41_00895 | Q48F88 | Positive | 5726539 - 5727216 | 25094.6 |
| lipoprotein | ALO41_00896 | P45682 | Positive | 5727425 - 5728291 | 30358.2 |
| rna polymerase sigma factor rpos | ALO41_00897 | P45684 | Positive | 5728395 - 5729402 | 38163.6 |
| ferredoxin | ALO41_00898 | P0A122 | Negative | 5729918 - 5730241 | 11955.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








