Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | ALO41_100633 | Q48F14 | Positive | 5603312 - 5604529 | 45372.1 |
| uncharacterized protein | ALO41_00132 | Not Available | Negative | 5604956 - 5605366 | 14893.5 |
| rhs element vgr protein | ALO41_102021 | Q9I737 | Negative | 5605424 - 5607033 | 60855.6 |
| hypothetical protein | ALO41_200028 | Not Available | Positive | 5607130 - 5607330 | 7359.02 |
| transposase, tn3 family | ALO41_05297 | Not Available | Negative | 5607413 - 5607658 | 9475.16 |
| type iii effector avra1 | ALO41_05667 | P11437 | Negative | 5607708 - 5610428 | 100520.0 |
| type iii effector hopq1-1 | ALO41_05326 | Not Available | Negative | 5610499 - 5610636 | 4991.06 |
| lysozyme | ALO41_03205 | P44187 | Positive | 5610863 - 5611141 | 10274.4 |
| dna adenine methylase | ALO41_04666 | Not Available | Positive | 5611312 - 5611898 | 22527.1 |
| rhs element vgr protein | ALO41_05251 | Not Available | Positive | 5611899 - 5612881 | 37343.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








