Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO41_04586 | Not Available | Positive | 5575483 - 5575596 | 3834.57 |
| d-alanine--d-alanine ligase | ALO41_00107 | Q87XJ6 | Positive | 5575615 - 5576706 | 39121.1 |
| mutt/nudix family protein | ALO41_00108 | Not Available | Positive | 5576703 - 5577113 | 14908.1 |
| xre family transcriptional regulator | ALO41_100224 | P45349 | Negative | 5577152 - 5578105 | 35370.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | ALO41_00109 | Q87XJ9 | Positive | 5578176 - 5578910 | 27520.1 |
| alpha/beta hydrolase fold protein | ALO41_00110 | Not Available | Positive | 5579022 - 5580026 | 36416.7 |
| 2-hydroxychromene-2-carboxylate isomerase family protein | ALO41_00111 | Not Available | Positive | 5580108 - 5580746 | 23875.1 |
| sigma-54 dependent dna-binding response regulator | ALO41_04587 | Q9HU19 | Negative | 5580878 - 5582206 | 48858.4 |
| sensor histidine kinase | ALO41_00113 | Q9HU20 | Negative | 5582217 - 5584148 | 71434.5 |
| amino acid abc transporter, atp-binding protein | ALO41_00114 | P0AAG4 | Negative | 5584204 - 5584467 | 9952.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








