Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein | ALO41_100013 | P27431 | Positive | 5541637 - 5542851 | 45763.1 |
| acetyltransferase | ALO41_01294 | O31628 | Positive | 5542844 - 5543275 | 16024.0 |
| hypothetical protein | ALO41_101905 | Not Available | Negative | 5543299 - 5543454 | 5823.21 |
| type ii and iii secretion system family protein | ALO41_01295 | Not Available | Positive | 5543447 - 5544196 | 26932.5 |
| hypothetical protein | ALO41_102258 | Not Available | Negative | 5544253 - 5544396 | 5224.41 |
| isocitrate lyase | ALO41_01296 | P51066 | Positive | 5544474 - 5545799 | 48639.3 |
| nadh-quinone oxidoreductase subunit a | ALO41_01297 | Q48H54 | Positive | 5546263 - 5546676 | 15143.8 |
| nadh-quinone oxidoreductase subunit b | ALO41_01298 | Q48H53 | Positive | 5546681 - 5547361 | 25657.9 |
| nadh-quinone oxidoreductase subunit c/d | ALO41_01299 | Q4ZRJ1 | Positive | 5547436 - 5549217 | 67716.2 |
| nadh:ubiquinone oxidoreductase, subunit e | ALO41_01300 | Q9I0J8 | Positive | 5549220 - 5549717 | 17908.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








