Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | ALO41_03964 | Q48CH7 | Negative | 5506828 - 5507997 | 40469.8 |
| d-erythrose-4-phosphate dehydrogenase | ALO41_03965 | A8APE1 | Negative | 5508014 - 5509057 | 38344.9 |
| transketolase | ALO41_05521 | Q8D6H8 | Negative | 5509209 - 5511287 | 75460.2 |
| transcriptional regulator, arsr family | ALO41_03966 | Not Available | Positive | 5511466 - 5512461 | 36121.4 |
| s-adenosylmethionine synthase | ALO41_03967 | Q88AK7 | Positive | 5512482 - 5513672 | 42589.6 |
| dna ligase b | ALO41_03968 | Q4ZLZ9 | Positive | 5514054 - 5515739 | 62328.4 |
| uncharacterized protein | ALO41_03969 | Not Available | Positive | 5515780 - 5516190 | 15186.0 |
| uncharacterized protein | ALO41_03970 | Not Available | Negative | 5516238 - 5516639 | 14159.7 |
| heavy metal sensor histidine kinase | ALO41_03971 | P0DMK6 | Negative | 5516754 - 5518145 | 51625.7 |
| dna-binding heavy metal response regulator | ALO41_03972 | Q44006 | Negative | 5518142 - 5518816 | 25704.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








