Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO41_04489 | Q87WS9 | Negative | 5471169 - 5471690 | 20124.1 |
| pmba protein | ALO41_04490 | P0AFK1 | Positive | 5471783 - 5473144 | 48534.5 |
| carbon-nitrogen hydrolase family protein | ALO41_02047 | Q93XI4 | Positive | 5473415 - 5474293 | 32802.7 |
| agmatine deiminase | ALO41_02048 | Q48Q55 | Positive | 5474299 - 5475405 | 40733.1 |
| uncharacterized protein | ALO41_02049 | Not Available | Positive | 5475629 - 5475862 | 8604.38 |
| outer membrane porin, oprd family | ALO41_02050 | Not Available | Positive | 5475981 - 5477351 | 49677.8 |
| membrane protein | ALO41_100073 | Not Available | Negative | 5477385 - 5477969 | 21979.4 |
| acetyltransferase, including n-acetylase of ribosomal protein | ALO41_100133 | Not Available | Positive | 5477955 - 5478587 | 24403.3 |
| acetyltransferase | ALO41_02051 | Not Available | Positive | 5478689 - 5479162 | 17779.4 |
| putative stability cassette protein | ALO41_02052 | P0C079 | Positive | 5479326 - 5479565 | 8955.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








