Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-aminovalerate aminotransferase / 4-aminobutyrate aminotransferase | ALO41_05017 | Not Available | Negative | 5249698 - 5251056 | 48402.6 |
| d-isomer specific 2-hydroxyacid dehydrogenase family protein | ALO41_02029 | A8GD46 | Positive | 5251074 - 5252216 | 42205.4 |
| succinic semialdehyde dehydrogenase | ALO41_05018 | Q9I6M5 | Negative | 5252409 - 5253977 | 56267.8 |
| acetylornithine deacetylase | ALO41_05019 | Q9CLT9 | Negative | 5253981 - 5255138 | 42044.8 |
| oxidoreductase, fad-binding | ALO41_02032 | Q92XP5 | Negative | 5255135 - 5256289 | 41996.5 |
| pyridine nucleotide-disulfide oxidoreductase family protein | ALO41_02033 | Not Available | Negative | 5256286 - 5257695 | 49996.1 |
| uncharacterized protein | ALO41_02034 | Not Available | Negative | 5257674 - 5257985 | 11491.9 |
| peptide abc transporter atp-binding protein | ALO41_02035 | Q32IB5 | Negative | 5257982 - 5259823 | 65987.1 |
| peptide abc transporter permease | ALO41_02036 | Not Available | Negative | 5259826 - 5260704 | 31181.9 |
| peptide abc transporter, permease protein | ALO41_02037 | Q57RB0 | Negative | 5260701 - 5261663 | 34071.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








