Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphopantetheinyl transferase | ALO41_101103 | Not Available | Positive | 5205415 - 5206059 | 23271.9 |
| protein product | ALO41_04123 | Not Available | Positive | 5206167 - 5206418 | 9093.21 |
| uncharacterized protein | ALO41_04124 | Not Available | Positive | 5206500 - 5206889 | 14110.0 |
| arac family transcriptional regulator | ALO41_05567 | Not Available | Positive | 5207205 - 5207855 | 24531.5 |
| amino acid transporter lyse | ALO41_04125 | Not Available | Positive | 5207875 - 5208480 | 21587.2 |
| formate transporter | ALO41_04126 | O05399 | Negative | 5208649 - 5208963 | 10953.4 |
| formate transporter | ALO41_04127 | Not Available | Negative | 5208997 - 5209464 | 16116.4 |
| hypothetical protein | ALO41_101564 | Not Available | Positive | 5209474 - 5209587 | 4226.27 |
| protein product | ALO41_04128 | Not Available | Positive | 5209831 - 5210082 | 9137.27 |
| hypothetical protein | ALO41_101736 | Not Available | Positive | 5210139 - 5210447 | 11498.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








