Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, asnc family | ALO41_04114 | Q8U0P3 | Negative | 5195547 - 5196008 | 16647.2 |
| putative membrane protein | ALO41_04115 | Not Available | Negative | 5196019 - 5197086 | 39155.5 |
| dna-binding protein | ALO41_04116 | Not Available | Positive | 5197398 - 5197721 | 12207.8 |
| uncharacterized protein | ALO41_04117 | Not Available | Positive | 5197721 - 5198575 | 31657.7 |
| uncharacterized protein | ALO41_04118 | Not Available | Positive | 5198735 - 5198947 | 7596.78 |
| peptidase, m20/m25/m40 family protein | ALO41_04119 | Not Available | Positive | 5199250 - 5200545 | 46237.0 |
| acetyltransferase | ALO41_04120 | Not Available | Positive | 5200663 - 5201166 | 19014.8 |
| hypothetical protein | ALO41_102501 | Not Available | Positive | 5201242 - 5201439 | 7500.32 |
| amino acid adenylation | ALO41_04121 | D9XF47 | Positive | 5201494 - 5202969 | 52885.5 |
| amino acid adenylation | ALO41_04122 | Not Available | Positive | 5202959 - 5205418 | 89068.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








